CLUSTAL 2.1 multiple sequence alignment pETEV-16b-ppdk ATAATTTTGTTTAACTTTAAGAAGGAGATATACCATGGGCCATCATCATCATCATCATCA FtPPDK-ref ------------------------------------------------------------ pETEV-16b-ppdk TCATCATCACAGCAGCGGCCATGAAAACCTGTATTTTCAGGGACATATGACCGCTAAAAA FtPPDK-ref -------------------------------------------CATATGACCGCTAAAAA ***************** pETEV-16b-ppdk ACGCGTGTTTACGTTCGGCAAAGGTCGCTCGGAAGGCAACCGTGACATGAAATCGCTGCT FtPPDK-ref ACGCGTGTTTACGTTCGGCAAAGGTCGCTCGGAAGGCAACCGTGACATGAAATCGCTGCT ************************************************************ pETEV-16b-ppdk GGGTGGCAAAGGTGCGAACCTGGCGGAAATGAGCTCTATTGGTCTGTCCGTGCCGCCGGG FtPPDK-ref GGGTGGCAAAGGTGCGAACCTGGCGGAAATGAGCTCTATTGGTCTGTCCGTGCCGCCGGG ************************************************************ pETEV-16b-ppdk TCTGACCATCTCAACGGAAGCCTGCGAAGAATATCAGCAAAATGGTAAATCGCTGCCGCC FtPPDK-ref TCTGACCATCTCAACGGAAGCCTGCGAAGAATATCAGCAAAATGGTAAATCGCTGCCGCC ************************************************************ pETEV-16b-ppdk GGGCCTGTGGGATGAAATCAGCGAAGGTCTGGACTACGTTCAGAAAGAAATGTCAGCCTC FtPPDK-ref GGGCCTGTGGGATGAAATCAGCGAAGGTCTGGACTACGTTCAGAAAGAAATGTCAGCCTC ************************************************************ pETEV-16b-ppdk GCTGGGCGATCCGTCGAAACCGCTGCTGCTGAGCGTCCGTTCTGGTGCGGCCATTAGCAT FtPPDK-ref GCTGGGCGATCCGTCGAAACCGCTGCTGCTGAGCGTCCGTTCTGGTGCGGCCATTAGCAT ************************************************************ pETEV-16b-ppdk GCCGGGCATGATGGATACCGTTCTGAACCTGGGTCTGAATGACGAAGTGGTTGCAGGTCT FtPPDK-ref GCCGGGCATGATGGATACCGTTCTGAACCTGGGTCTGAATGACGAAGTGGTTGCAGGTCT ************************************************************ pETEV-16b-ppdk GGCCGGTAAATCGGGTGCTCGTTTCGCGTATGATAGCTACCGTCGCTTTCTGGACATGTT FtPPDK-ref GGCCGGTAAATCGGGTGCTCGTTTCGCGTATGATAGCTACCGTCGCTTTCTGGACATGTT ************************************************************ pETEV-16b-ppdk CGGTAACGTCGTGATGGGCATCCCGCATAGCCTGTTTGATGAAAAACTGGAACAGATGAA FtPPDK-ref CGGTAACGTCGTGATGGGCATCCCGCATAGCCTGTTTGATGAAAAACTGGAACAGATGAA ************************************************************ pETEV-16b-ppdk AGCCGAAAAAGGTATTCACCTGGATACCGACCTGACGGCAGCTGATCTGAAAGACCTGGT FtPPDK-ref AGCCGAAAAAGGTATTCACCTGGATACCGACCTGACGGCAGCTGATCTGAAAGACCTGGT ************************************************************ pETEV-16b-ppdk GGAAAAATATAAAAACGTTTACGTCGAAGCGAAAGGCGAAAAATTCCCGACCGATCCGAA FtPPDK-ref GGAAAAATATAAAAACGTTTACGTCGAAGCGAAAGGCGAAAAATTCCCGACCGATCCGAA ************************************************************ pETEV-16b-ppdk AAAACAGCTGGAACTGGCCGTCAATGCAGTGTTTGATAGTTGGGACTCCCCGCGTGCCAA FtPPDK-ref AAAACAGCTGGAACTGGCCGTCAATGCAGTGTTTGATAGTTGGGACTCCCCGCGTGCCAA ************************************************************ pETEV-16b-ppdk CAAATATCGCTCCATTAATCAGATCACCGGTCTGAAAGGCACGGCAGTGAATATTCAATC FtPPDK-ref CAAATATCGCTCCATTAATCAGATCACCGGTCTGAAAGGCACGGCAGTGAATATTCAATC ************************************************************ pETEV-16b-ppdk TATGGTTTTCGGTAACATGGGCAATACCAGTGGCACGGGTGTGCTGTTTACCCGTAACCC FtPPDK-ref TATGGTTTTCGGTAACATGGGCAATACCAGTGGCACGGGTGTGCTGTTTACCCGTAACCC ************************************************************ pETEV-16b-ppdk GAGCACGGGCGAGAAAAAACTGTACGGCGAATTCCTGATTAATGCCCAGGGTGAAGATGT FtPPDK-ref GAGCACGGGCGAGAAAAAACTGTACGGCGAATTCCTGATTAATGCCCAGGGTGAAGATGT ************************************************************ pETEV-16b-ppdk TGTCGCAGGCATCCGCACCCCGGAAGATCTGGGTACCATGGAAACGTGCATGCCGGAAGC FtPPDK-ref TGTCGCAGGCATCCGCACCCCGGAAGATCTGGGTACCATGGAAACGTGCATGCCGGAAGC ************************************************************ pETEV-16b-ppdk GTATAAAGAACTGGTGGAAAACTGTGAAATTCTGGAACGTCATTACAAAGATATGATGGA FtPPDK-ref GTATAAAGAACTGGTGGAAAACTGTGAAATTCTGGAACGTCATTACAAAGATATGATGGA ************************************************************ pETEV-16b-ppdk CATCGAATTCACCGTTCAGGAAAATCGCCTGTGGATGCTGCAATGTCGTACCGGTAAACG FtPPDK-ref CATCGAATTCACCGTTCAGGAAAATCGCCTGTGGATGCTGCAATGTCGTACCGGTAAACG ************************************************************ pETEV-16b-ppdk CACGGGCAAAGGTGCTGTGCGTATTGCGGTTGATATGGTCAACGAAGGCCTGATTGACAC FtPPDK-ref CACGGGCAAAGGTGCTGTGCGTATTGCGGTTGATATGGTCAACGAAGGCCTGATTGACAC ************************************************************ pETEV-16b-ppdk CCGTACGGCAATCAAACGCGTTGAAACCCAGCATCTGGATCAACTGCTGCACCCGCAGTT FtPPDK-ref CCGTACGGCAATCAAACGCGTTGAAACCCAGCATCTGGATCAACTGCTGCACCCGCAGTT ************************************************************ pETEV-16b-ppdk CGAAGACCCGTCAGCGTATAAATCGCATGTGGTTGCCACCGGTCTGCCGGCATCCCCGGG FtPPDK-ref CGAAGACCCGTCAGCGTATAAATCGCATGTGGTTGCCACCGGTCTGCCGGCATCCCCGGG ************************************************************ pETEV-16b-ppdk TGCAGCAGTGGGCCAGGTTTGCTTTTCAGCTGAAGATGCGGAAACGTGGCACGCTCAGGG FtPPDK-ref TGCAGCAGTGGGCCAGGTTTGCTTTTCAGCTGAAGATGCGGAAACGTGGCACGCTCAGGG ************************************************************ pETEV-16b-ppdk TAAATCCGCGATCCTGGTGCGCACCGAAACGTCACCGGAAGATGTTGGCGGTATGCATGC FtPPDK-ref TAAATCCGCGATCCTGGTGCGCACCGAAACGTCACCGGAAGATGTTGGCGGTATGCATGC ************************************************************ pETEV-16b-ppdk AGCTGCGGGCATTCTGACCGCACGTGGCGGTATGACGTCCCACGCAGCAGTCGTGGCTCG FtPPDK-ref AGCTGCGGGCATTCTGACCGCACGTGGCGGTATGACGTCCCACGCAGCAGTCGTGGCTCG ************************************************************ pETEV-16b-ppdk CGGCTGGGGTAAATGCTGTGTCTCAGGTTGTGCGGATATCCGTGTGAACGATGACATGAA FtPPDK-ref CGGCTGGGGTAAATGCTGTGTCTCAGGTTGTGCGGATATCCGTGTGAACGATGACATGAA ************************************************************ pETEV-16b-ppdk AATCTTCACCATCGGTGATCGCGTGATCAAAGAAGGCGACTGGCTGAGCCTGAACGGTAC FtPPDK-ref AATCTTCACCATCGGTGATCGCGTGATCAAAGAAGGCGACTGGCTGAGCCTGAACGGTAC ************************************************************ pETEV-16b-ppdk CACGGGCGAAGTTATTCTGGGTAAACAGCTGCTGGCACCGCCGGCAATGTCTAATGATCT FtPPDK-ref CACGGGCGAAGTTATTCTGGGTAAACAGCTGCTGGCACCGCCGGCAATGTCTAATGATCT ************************************************************ pETEV-16b-ppdk GGAAATCTTTATGAGTTGGGCTGACCAGGCGCGTCGCCTGAAAGTGATGGCTAACGCGGA FtPPDK-ref GGAAATCTTTATGAGTTGGGCTGACCAGGCGCGTCGCCTGAAAGTGATGGCTAACGCGGA ************************************************************ pETEV-16b-ppdk TACCCCGAATGACGCCCTGACGGCACGTAACAATGGTGCACAGGGTATTGGTCTGTGCCG FtPPDK-ref TACCCCGAATGACGCCCTGACGGCACGTAACAATGGTGCACAGGGTATTGGTCTGTGCCG ************************************************************ pETEV-16b-ppdk TACCGAACACATGTTTTTCGCTTCTGATGAACGTATTAAAGCGGTCCGCAAAATGATCAT FtPPDK-ref TACCGAACACATGTTTTTCGCTTCTGATGAACGTATTAAAGCGGTCCGCAAAATGATCAT ************************************************************ pETEV-16b-ppdk GGCCGTGACGCCGGAACAGCGTAAAGTTGCTCTGGATCTGCTGCTGCCGTATCAACGTAG FtPPDK-ref GGCCGTGACGCCGGAACAGCGTAAAGTTGCTCTGGATCTGCTGCTGCCGTATCAACGTAG ************************************************************ pETEV-16b-ppdk TGACTTTGAAGGTATTTTCCGCGCAATGGATGGCCTGCCGGTGACCATCCGTCTGCTGGA FtPPDK-ref TGACTTTGAAGGTATTTTCCGCGCAATGGATGGCCTGCCGGTGACCATCCGTCTGCTGGA ************************************************************ pETEV-16b-ppdk TCCGCCGCTGCATGAATTTCTGCCGGAAGGTGATCTGGAACACATTGTTAACGAACTGGC FtPPDK-ref TCCGCCGCTGCATGAATTTCTGCCGGAAGGTGATCTGGAACACATTGTTAACGAACTGGC ************************************************************ pETEV-16b-ppdk AGTCGATACGGGCATGAGCGCTGACGAAATCTACTCTAAAATCGAAAACCTGAGTGAAGT FtPPDK-ref AGTCGATACGGGCATGAGCGCTGACGAAATCTACTCTAAAATCGAAAACCTGAGTGAAGT ************************************************************ pETEV-16b-ppdk TAATCCGATGCTGGGTTTCCGTGGCTGTCGCCTGGGTATTTCGTACCCGGAACTGACCGA FtPPDK-ref TAATCCGATGCTGGGTTTCCGTGGCTGTCGCCTGGGTATTTCGTACCCGGAACTGACCGA ************************************************************ pETEV-16b-ppdk AATGCAGGTTCGTGCCATCTTTCAAGCTGCGGTCAGCATGACCAACCAGGGTGTGACGGT FtPPDK-ref AATGCAGGTTCGTGCCATCTTTCAAGCTGCGGTCAGCATGACCAACCAGGGTGTGACGGT ************************************************************ pETEV-16b-ppdk TATTCCGGAAATCATGGTCCCGCTGGTTGGCACCCCGCAGGAACTGCGTCACCAAATTTC FtPPDK-ref TATTCCGGAAATCATGGTCCCGCTGGTTGGCACCCCGCAGGAACTGCGTCACCAAATTTC ************************************************************ pETEV-16b-ppdk TGTTATCCGCGGCGTCGCCGCAAATGTGTTTGCGGAAATGGGTGTCACCCTGGAATATAA FtPPDK-ref TGTTATCCGCGGCGTCGCCGCAAATGTGTTTGCGGAAATGGGTGTCACCCTGGAATATAA ************************************************************ pETEV-16b-ppdk AGTGGGCACGATGATTGAAATCCCGCGTGCTGCGCTGATTGCGGAAGAAATCGGTAAAGA FtPPDK-ref AGTGGGCACGATGATTGAAATCCCGCGTGCTGCGCTGATTGCGGAAGAAATCGGTAAAGA ************************************************************ pETEV-16b-ppdk AGCCGATTTCTTTAGCTTTGGCACCAACGACCTGACCCAGATGACGTTCGGTTATAGTCG FtPPDK-ref AGCCGATTTCTTTAGCTTTGGCACCAACGACCTGACCCAGATGACGTTCGGTTATAGTCG ************************************************************ pETEV-16b-ppdk CGATGACGTGGGCAAATTTCTGCAAATTTACCTGGCCCAGGGTATCCTGCAACATGATCC FtPPDK-ref CGATGACGTGGGCAAATTTCTGCAAATTTACCTGGCCCAGGGTATCCTGCAACATGATCC ************************************************************ pETEV-16b-ppdk GTTTGAAGTTATTGACCAGAAAGGCGTCGGTCAACTGATCAAAATGGCAACCGAAAAAGG FtPPDK-ref GTTTGAAGTTATTGACCAGAAAGGCGTCGGTCAACTGATCAAAATGGCAACCGAAAAAGG ************************************************************ pETEV-16b-ppdk CCGCGCCGCAAATCCGAGTCTGAAAGTGGGTATTTGCGGCGAACACGGCGGTGAACCGAG FtPPDK-ref CCGCGCCGCAAATCCGAGTCTGAAAGTGGGTATTTGCGGCGAACACGGCGGTGAACCGAG ************************************************************ pETEV-16b-ppdk TTCCGTGGCGTTTTTCGATGGCGTTGGTCTGGACTACGTTAGTTGTTCCCCGTTTCGTGT FtPPDK-ref TTCCGTGGCGTTTTTCGATGGCGTTGGTCTGGACTACGTTAGTTGTTCCCCGTTTCGTGT ************************************************************ pETEV-16b-ppdk CCCGATTGCCCGTCTGGCTGCCGCCCAAGTGATTGTTTAACTCGAGGATCCGGCTGCTAA FtPPDK-ref CCCGATTGCCCGTCTGGCTGCCGCCCAAGTGATTGTTTAACTCGAG-------------- ********************************************** pETEV-16b-ppdk CAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACC FtPPDK-ref ------------------------------------------------------------ pETEV-16b-ppdk CCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTG FtPPDK-ref -------------------------------------