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Material und Methoden vervollständigt; Beginn Ergebnisteil

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This commit is contained in:
Alexander Minges 2012-08-01 18:48:23 +02:00
parent 9119d1667b
commit 8871a9ffe7
19 changed files with 45743 additions and 2011 deletions
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misc/seq_ref_aln.fa Normal file
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>pETEV-16b-ppdk
ATGGGCCATCATCATCATCATCATCATCATCATCACAGCAGCGGCCATGAAAACCTGTATTTTCAGGGAC
ATATGACCGCTAAAAAACGCGTGTTTACGTTCGGCAAAGGTCGCTCGGAAGGCAACCGTGACATGAAATC
GCTGCTGGGTGGCAAAGGTGCGAACCTGGCGGAAATGAGCTCTATTGGTCTGTCCGTGCCGCCGGGTCTG
ACCATCTCAACGGAAGCCTGCGAAGAATATCAGCAAAATGGTAAATCGCTGCCGCCGGGCCTGTGGGATG
AAATCAGCGAAGGTCTGGACTACGTTCAGAAAGAAATGTCAGCCTCGCTGGGCGATCCGTCGAAACCGCT
GCTGCTGAGCGTCCGTTCTGGTGCGGCCATTAGCATGCCGGGCATGATGGATACCGTTCTGAACCTGGGT
CTGAATGACGAAGTGGTTGCAGGTCTGGCCGGTAAATCGGGTGCTCGTTTCGCGTATGATAGCTACCGTC
GCTTTCTGGACATGTTCGGTAACGTCGTGATGGGCATCCCGCATAGCCTGTTTGATGAAAAACTGGAACA
GATGAAAGCCGAAAAAGGTATTCACCTGGATACCGACCTGACGGCAGCTGATCTGAAAGACCTGGTGGAA
AAATATAAAAACGTTTACGTCGAAGCGAAAGGCGAAAAATTCCCGACCGATCCGAAAAAACAGCTGGAAC
TGGCCGTCAATGCAGTGTTTGATAGTTGGGACTCCCCGCGTGCCAACAAATATCGCTCCATTAATCAGAT
CACCGGTCTGAAAGGCACGGCAGTGAATATTCAATCTATGGTTTTCGGTAACATGGGCAATACCAGTGGC
ACGGGTGTGCTGTTTACCCGTAACCCGAGCACGGGCGAGAAAAAACTGTACGGCGAATTCCTGATTAATG
CCCAGGGTGAAGATGTTGTCGCAGGCATCCGCACCCCGGAAGATCTGGGTACCATGGAAACGTGCATGCC
GGAAGCGTATAAAGAACTGGTGGAAAACTGTGAAATTCTGGAACGTCATTACAAAGATATGATGGACATC
GAATTCACCGTTCAGGAAAATCGCCTGTGGATGCTGCAATGTCGTACCGGTAAACGCACGGGCAAAGGTG
CTGTGCGTATTGCGGTTGATATGGTCAACGAAGGCCTGATTGACACCCGTACGGCAATCAAACGCGTTGA
AACCCAGCATCTGGATCAACTGCTGCACCCGCAGTTCGAAGACCCGTCAGCGTATAAATCGCATGTGGTT
GCCACCGGTCTGCCGGCATCCCCGGGTGCAGCAGTGGGCCAGGTTTGCTTTTCAGCTGAAGATGCGGAAA
CGTGGCACGCTCAGGGTAAATCCGCGATCCTGGTGCGCACCGAAACGTCACCGGAAGATGTTGGCGGTAT
GCATGCAGCTGCGGGCATTCTGACCGCACGTGGCGGTATGACGTCCCACGCAGCAGTCGTGGCTCGCGGC
TGGGGTAAATGCTGTGTCTCAGGTTGTGCGGATATCCGTGTGAACGATGACATGAAAATCTTCACCATCG
GTGATCGCGTGATCAAAGAAGGCGACTGGCTGAGCCTGAACGGTACCACGGGCGAAGTTATTCTGGGTAA
ACAGCTGCTGGCACCGCCGGCAATGTCTAATGATCTGGAAATCTTTATGAGTTGGGCTGACCAGGCGCGT
CGCCTGAAAGTGATGGCTAACGCGGATACCCCGAATGACGCCCTGACGGCACGTAACAATGGTGCACAGG
GTATTGGTCTGTGCCGTACCGAACACATGTTTTTCGCTTCTGATGAACGTATTAAAGCGGTCCGCAAAAT
GATCATGGCCGTGACGCCGGAACAGCGTAAAGTTGCTCTGGATCTGCTGCTGCCGTATCAACGTAGTGAC
TTTGAAGGTATTTTCCGCGCAATGGATGGCCTGCCGGTGACCATCCGTCTGCTGGATCCGCCGCTGCATG
AATTTCTGCCGGAAGGTGATCTGGAACACATTGTTAACGAACTGGCAGTCGATACGGGCATGAGCGCTGA
CGAAATCTACTCTAAAATCGAAAACCTGAGTGAAGTTAATCCGATGCTGGGTTTCCGTGGCTGTCGCCTG
GGTATTTCGTACCCGGAACTGACCGAAATGCAGGTTCGTGCCATCTTTCAAGCTGCGGTCAGCATGACCA
ACCAGGGTGTGACGGTTATTCCGGAAATCATGGTCCCGCTGGTTGGCACCCCGCAGGAACTGCGTCACCA
AATTTCTGTTATCCGCGGCGTCGCCGCAAATGTGTTTGCGGAAATGGGTGTCACCCTGGAATATAAAGTG
GGCACGATGATTGAAATCCCGCGTGCTGCGCTGATTGCGGAAGAAATCGGTAAAGAAGCCGATTTCTTTA
GCTTTGGCACCAACGACCTGACCCAGATGACGTTCGGTTATAGTCGCGATGACGTGGGCAAATTTCTGCA
AATTTACCTGGCCCAGGGTATCCTGCAACATGATCCGTTTGAAGTTATTGACCAGAAAGGCGTCGGTCAA
CTGATCAAAATGGCAACCGAAAAAGGCCGCGCCGCAAATCCGAGTCTGAAAGTGGGTATTTGCGGCGAAC
ACGGCGGTGAACCGAGTTCCGTGGCGTTTTTCGATGGCGTTGGTCTGGACTACGTTAGTTGTTCCCCGTT
TCGTGTCCCGATTGCCCGTCTGGCTGCCGCCCAAGTGATTGTTTAACTCGAGGATCC
>FtPPDK-ref
ATGGGCCATCATCATCATCATCATCATCATCATCACAGCAGCGGCCATGAAAACCTGTATTTTCAGGGAC
ATATGACCGCTAAAAAACGCGTGTTTACGTTCGGCAAAGGTCGCTCGGAAGGCAACCGTGACATGAAATC
GCTGCTGGGTGGCAAAGGTGCGAACCTGGCGGAAATGAGCTCTATTGGTCTGTCCGTGCCGCCGGGTCTG
ACCATCTCAACGGAAGCCTGCGAAGAATATCAGCAAAATGGTAAATCGCTGCCGCCGGGCCTGTGGGATG
AAATCAGCGAAGGTCTGGACTACGTTCAGAAAGAAATGTCAGCCTCGCTGGGCGATCCGTCGAAACCGCT
GCTGCTGAGCGTCCGTTCTGGTGCGGCCATTAGCATGCCGGGCATGATGGATACCGTTCTGAACCTGGGT
CTGAATGACGAAGTGGTTGCAGGTCTGGCCGGTAAATCGGGTGCTCGTTTCGCGTATGATAGCTACCGTC
GCTTTCTGGACATGTTCGGTAACGTCGTGATGGGCATCCCGCATAGCCTGTTTGATGAAAAACTGGAACA
GATGAAAGCCGAAAAAGGTATTCACCTGGATACCGACCTGACGGCAGCTGATCTGAAAGACCTGGTGGAA
AAATATAAAAACGTTTACGTCGAAGCGAAAGGCGAAAAATTCCCGACCGATCCGAAAAAACAGCTGGAAC
TGGCCGTCAATGCAGTGTTTGATAGTTGGGACTCCCCGCGTGCCAACAAATATCGCTCCATTAATCAGAT
CACCGGTCTGAAAGGCACGGCAGTGAATATTCAATCTATGGTTTTCGGTAACATGGGCAATACCAGTGGC
ACGGGTGTGCTGTTTACCCGTAACCCGAGCACGGGCGAGAAAAAACTGTACGGCGAATTCCTGATTAATG
CCCAGGGTGAAGATGTTGTCGCAGGCATCCGCACCCCGGAAGATCTGGGTACCATGGAAACGTGCATGCC
GGAAGCGTATAAAGAACTGGTGGAAAACTGTGAAATTCTGGAACGTCATTACAAAGATATGATGGACATC
GAATTCACCGTTCAGGAAAATCGCCTGTGGATGCTGCAATGTCGTACCGGTAAACGCACGGGCAAAGGTG
CTGTGCGTATTGCGGTTGATATGGTCAACGAAGGCCTGATTGACACCCGTACGGCAATCAAACGCGTTGA
AACCCAGCATCTGGATCAACTGCTGCACCCGCAGTTCGAAGACCCGTCAGCGTATAAATCGCATGTGGTT
GCCACCGGTCTGCCGGCATCCCCGGGTGCAGCAGTGGGCCAGGTTTGCTTTTCAGCTGAAGATGCGGAAA
CGTGGCACGCTCAGGGTAAATCCGCGATCCTGGTGCGCACCGAAACGTCACCGGAAGATGTTGGCGGTAT
GCATGCAGCTGCGGGCATTCTGACCGCACGTGGCGGTATGACGTCCCACGCAGCAGTCGTGGCTCGCGGC
TGGGGTAAATGCTGTGTCTCAGGTTGTGCGGATATCCGTGTGAACGATGACATGAAAATCTTCACCATCG
GTGATCGCGTGATCAAAGAAGGCGACTGGCTGAGCCTGAACGGTACCACGGGCGAAGTTATTCTGGGTAA
ACAGCTGCTGGCACCGCCGGCAATGTCTAATGATCTGGAAATCTTTATGAGTTGGGCTGACCAGGCGCGT
CGCCTGAAAGTGATGGCTAACGCGGATACCCCGAATGACGCCCTGACGGCACGTAACAATGGTGCACAGG
GTATTGGTCTGTGCCGTACCGAACACATGTTTTTCGCTTCTGATGAACGTATTAAAGCGGTCCGCAAAAT
GATCATGGCCGTGACGCCGGAACAGCGTAAAGTTGCTCTGGATCTGCTGCTGCCGTATCAACGTAGTGAC
TTTGAAGGTATTTTCCGCGCAATGGATGGCCTGCCGGTGACCATCCGTCTGCTGGATCCGCCGCTGCATG
AATTTCTGCCGGAAGGTGATCTGGAACACATTGTTAACGAACTGGCAGTCGATACGGGCATGAGCGCTGA
CGAAATCTACTCTAAAATCGAAAACCTGAGTGAAGTTAATCCGATGCTGGGTTTCCGTGGCTGTCGCCTG
GGTATTTCGTACCCGGAACTGACCGAAATGCAGGTTCGTGCCATCTTTCAAGCTGCGGTCAGCATGACCA
ACCAGGGTGTGACGGTTATTCCGGAAATCATGGTCCCGCTGGTTGGCACCCCGCAGGAACTGCGTCACCA
AATTTCTGTTATCCGCGGCGTCGCCGCAAATGTGTTTGCGGAAATGGGTGTCACCCTGGAATATAAAGTG
GGCACGATGATTGAAATCCCGCGTGCTGCGCTGATTGCGGAAGAAATCGGTAAAGAAGCCGATTTCTTTA
GCTTTGGCACCAACGACCTGACCCAGATGACGTTCGGTTATAGTCGCGATGACGTGGGCAAATTTCTGCA
AATTTACCTGGCCCAGGGTATCCTGCAACATGATCCGTTTGAAGTTATTGACCAGAAAGGCGTCGGTCAA
CTGATCAAAATGGCAACCGAAAAAGGCCGCGCCGCAAATCCGAGTCTGAAAGTGGGTATTTGCGGCGAAC
ACGGCGGTGAACCGAGTTCCGTGGCGTTTTTCGATGGCGTTGGTCTGGACTACGTTAGTTGTTCCCCGTT
TCGTGTCCCGATTGCCCGTCTGGCTGCCGCCCAAGTGATTGTTTAACTCGAGGATCC